R version 4.3.3 (2024-02-29)
Platform: x86_64-apple-darwin13.4.0 (64-bit)
Running under: macOS Big Sur ... 10.16

Matrix products: default
BLAS/LAPACK: /Volumes/omics/scratch/AREE/CGIG_THERMOTOL_RNASEQ_PRJNA694496/analysis-env/lib/libopenblasp-r0.3.34.dylib;  LAPACK version 3.12.0

locale:
[1] C

time zone: America/Los_Angeles
tzcode source: system (macOS)

attached base packages:
[1] stats4    stats     graphics  grDevices utils     datasets  methods  
[8] base     

other attached packages:
 [1] tximport_1.30.0             DESeq2_1.42.0              
 [3] SummarizedExperiment_1.32.0 Biobase_2.62.0             
 [5] MatrixGenerics_1.14.0       matrixStats_1.5.0          
 [7] GenomicRanges_1.54.1        GenomeInfoDb_1.38.1        
 [9] IRanges_2.36.0              S4Vectors_0.40.2           
[11] BiocGenerics_0.48.1        

loaded via a namespace (and not attached):
 [1] SparseArray_1.2.2       bitops_1.0-9            lattice_0.22-7         
 [4] magrittr_2.0.3          grid_4.3.3              RColorBrewer_1.1-3     
 [7] mvtnorm_1.3-3           plyr_1.8.9              Matrix_1.6-5           
[10] scales_1.4.0            numDeriv_2016.8-1.1     codetools_0.2-20       
[13] abind_1.4-5             emdbook_1.3.14          cli_3.6.5              
[16] bbmle_1.0.25.1          rlang_1.1.6             crayon_1.5.3           
[19] XVector_0.42.0          withr_3.0.2             DelayedArray_0.28.0    
[22] S4Arrays_1.2.0          tools_4.3.3             parallel_4.3.3         
[25] BiocParallel_1.36.0     coda_0.19-4.1           bdsmatrix_1.3-7        
[28] colorspace_2.1-1        ggplot2_3.5.2           locfit_1.5-9.12        
[31] GenomeInfoDbData_1.2.11 vctrs_0.6.5             R6_2.6.1               
[34] lifecycle_1.0.4         zlibbioc_1.48.0         MASS_7.3-60.0.1        
[37] pkgconfig_2.0.3         pillar_1.11.0           gtable_0.3.6           
[40] glue_1.8.0              Rcpp_1.1.0              tibble_3.3.0           
[43] farver_2.1.2            labeling_0.4.3          apeglm_1.24.0          
[46] compiler_4.3.3          RCurl_1.98-1.16