Here is a quick explanation of what many folks are running into. The challenge and the solution is very dependent on the species you are working with.
Steven Roberts 
October 3, 2024
Here is a quick explanation of what many folks are running into. The challenge and the solution is very dependent on the species you are working with.
---
title: "Connecting annotations"
description: "challenges post HiSat"
categories: [blast, hisat, annotation]
#citation:
date: 10-03-2024
image: http://gannet.fish.washington.edu/seashell/snaps/Monosnap_bestblogever_-_main_-_RStudio_2024-10-03_10-09-40.png # finding a good image
author:
- name: Steven Roberts
url:
orcid: 0000-0001-8302-1138
affiliation: Professor, UW - School of Aquatic and Fishery Sciences
affiliation-url: https://robertslab.info
#url: # self-defined
draft: false # setting this to `true` will prevent your post from appearing on your listing page until you're ready!
format:
html:
code-fold: FALSE
code-tools: true
code-copy: true
highlight-style: github
code-overflow: wrap
---
```{r setup, include=FALSE}
knitr::opts_chunk$set(
echo = TRUE, # Display code chunks
eval = FALSE, # Evaluate code chunks
warning = FALSE, # Hide warnings
message = FALSE, # Hide messages
fig.width = 6, # Set plot width in inches
fig.height = 4, # Set plot height in inches
fig.align = "center", # Align plots to the center
comment = "" # Prevents appending '##' to beginning of lines in code analyses
)
```
Here is a quick explanation of what many folks are running into. The challenge and the solution is very dependent on the species you are working with.
{{< video https://gannet.fish.washington.edu/seashell/snaps/RPReplay_Final1727953956.MP4 >}}