October 3, 2024
Here is a quick explanation of what many folks are running into. The challenge and the solution is very dependent on the species you are working with.
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---
title: "Connecting annotations"
description: "challenges post HiSat"
categories: [blast, hisat, annotation]
#citation:
date: 10-03-2024
image: http://gannet.fish.washington.edu/seashell/snaps/Monosnap_bestblogever_-_main_-_RStudio_2024-10-03_10-09-40.png # finding a good image
author:
- name: Steven Roberts
url:
orcid: 0000-0001-8302-1138
affiliation: Professor, UW - School of Aquatic and Fishery Sciences
affiliation-url: https://robertslab.info
#url: # self-defined
draft: false # setting this to `true` will prevent your post from appearing on your listing page until you're ready!
format:
html:
code-fold: FALSE
code-tools: true
code-copy: true
highlight-style: github
code-overflow: wrap
---
```{r setup, include=FALSE}
knitr::opts_chunk$set(
echo = TRUE, # Display code chunks
eval = FALSE, # Evaluate code chunks
warning = FALSE, # Hide warnings
message = FALSE, # Hide messages
fig.width = 6, # Set plot width in inches
fig.height = 4, # Set plot height in inches
fig.align = "center", # Align plots to the center
comment = "" # Prevents appending '##' to beginning of lines in code analyses
)
```
Here is a quick explanation of what many folks are running into. The challenge and the solution is very dependent on the species you are working with.
{{< video https://gannet.fish.washington.edu/seashell/snaps/RPReplay_Final1727953956.MP4 >}}